calcStrength.single: Calculate the Strength for Each Interacting Pair.

In stevexniu/scMatchmaker: Single Cell Matchmaker

Calculate the Strength for Each Interacting Pair.

Description

Calculate the strength for each interacting pair.

Usage

calcStrength.single(ligand, receptor, f = c("+", "*"), threshold = 0)

Arguments

ligand	A ligand expression data.
receptor	A receptor expression data.
f	Functions used to calculate pair strength. +, using sum of the pairs (Default). *, using product of the pairs.
threshold	Threshold used for interaction products. Default is 0, therefore interaction product (ligand*receptor) equal or below 0 will be removed.

Value

Returns calculated interacting strength.

stevexniu/scMatchmaker documentation built on June 2, 2022, 12:35 p.m.