matchNames: Match the Names of Inteactions Pairs in Expression Data.

In stevexniu/scMatchmaker: Single Cell Matchmaker

Match the Names of Inteactions Pairs in Expression Data.

Description

Match and filter the expression data and interacton pairs.

Usage

matchNames(data, pairs, partner_a = 1, partner_b = 2)

Arguments

data	Expression data. A d x M matrix with d rows of features and M columns of data points (cells).
pairs	Interaction pair data with at least two columns indicating gene-gene interaction partners.
partner_a	Column name or index for interaction partner a. Defaulte is 1, the first column in interaction pair data.
partner_b	Column name or index for interaction partner b. Defaulte is 2, the second column in interaction pairs data.

Value

Returns a list with filtered expression data and interaction pairs.

stevexniu/scMatchmaker documentation built on June 2, 2022, 12:35 p.m.