getMarkerGenesInfo: Get marker genes information for any selected cluster.
In supatt-lab/SingCellaR: SingCellaR: an integrative analysis tool for single-cell RNA sequencing (scRNA-seq) data
View source: R/SingleCellRNASeq.R
getMarkerGenesInfo R Documentation
Get marker genes information for any selected cluster.
Description
Get marker genes information for any selected cluster.
Usage
getMarkerGenesInfo(
object,
cluster.type = c("louvain", "walktrap", "kmeans", "merged_louvain", "merged_walktrap",
"merged_kmeans"),
cluster_id = "cl1"
)
Arguments
object
The SingCellaR object.
cluster.type
The type of clustering method.
cluster_id
The specified cluster ID (e.g. cluster1)
Value
a dataframe of marker information
supatt-lab/SingCellaR documentation built on Aug. 24, 2023, 5:49 p.m.
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View source: R/SingleCellRNASeq.R
| getMarkerGenesInfo | R Documentation |
Get marker genes information for any selected cluster.
Description
Get marker genes information for any selected cluster.
Usage
getMarkerGenesInfo(
object,
cluster.type = c("louvain", "walktrap", "kmeans", "merged_louvain", "merged_walktrap",
"merged_kmeans"),
cluster_id = "cl1"
)
Arguments
object |
The SingCellaR object. |
cluster.type |
The type of clustering method. |
cluster_id |
The specified cluster ID (e.g. cluster1) |
Value
a dataframe of marker information
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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