buildLambda: Auxiliary function to generate suitable lambda parameters

In sysbiomed/glmSparseNet: Network Centrality Metrics for Elastic-Net Regularized Models

Auxiliary function to generate suitable lambda parameters

Description

Auxiliary function to generate suitable lambda parameters

Usage

buildLambda(
  lambdaLargest = NULL,
  xdata = NULL,
  ydata = NULL,
  family = NULL,
  ordersOfMagnitudeSmaller = 3,
  lambdaPerOrderMagnitude = 150,
  lambda.largest = deprecated(),
  orders.of.magnitude.smaller = deprecated(),
  lambda.per.order.magnitude = deprecated()
)

Arguments

lambdaLargest	numeric value for largest number of lambda to consider (usually with a target of 1 selected variable)
xdata	X parameter for glmnet function
ydata	Y parameter for glmnet function
family	family parameter to glmnet function
ordersOfMagnitudeSmaller	minimum value for lambda (lambda.largest / 10^orders.of.magnitude.smaller)
lambdaPerOrderMagnitude	how many lambdas to create for each order of magnitude
lambda.largest
orders.of.magnitude.smaller
lambda.per.order.magnitude

Value

a numeric vector with suitable lambdas

Examples

buildLambda(5.4)

sysbiomed/glmSparseNet documentation built on Feb. 17, 2024, 1:38 p.m.