View source: R/network_options.R
networkOptions  R Documentation 
Setup network options, such as using weighted or unweighted degree, which centrality measure to use
networkOptions(
method = "pearson",
unweighted = TRUE,
cutoff = 0,
centrality = "degree",
minDegree = 0,
nCores = 1,
transFun = function(x) x,
min.degree = deprecated(),
n.cores = deprecated(),
trans.fun = deprecated()
)
method 
in case of correlation and covariance, which method to use. 
unweighted 
calculate degree using unweighted network. 
cutoff 
cuttoff value in network edges to trim the network. 
centrality 
centrality measure to use, currently only supports degree. 
minDegree 
minimum value that individual penalty weight can take. 
nCores 
number of cores to use, default to 1. 
transFun 
See details below. 
min.degree 

n.cores 

trans.fun 
The 
a list of options
glmOrphan()
and glmDegree()
networkOptions(unweighted = FALSE)
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