dot-combinedScore: Calculate combined score for STRINGdb interactions
In sysbiomed/glmSparseNet: Network Centrality Metrics for Elastic-Net Regularized Models
.combinedScore R Documentation
Calculate combined score for STRINGdb interactions
Description
Please note that all the interactions have duplicates as it's
a two way interaction (score(ProteinA-Protein) == score(ProteinB, PorteinA))
Usage
.combinedScore(allInteractions, scoreThreshold, removeText)
Arguments
allInteractions
table with score of all interactions
scoreThreshold
threshold to keep interactions
removeText
remove text-based interactions
Details
To better understand how the score is calculated, please see:
https://string-db.org/help/faq/#how-are-the-scores-computed
Value
table with combined score
sysbiomed/glmSparseNet documentation built on Feb. 17, 2024, 1:38 p.m.
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| .combinedScore | R Documentation |
Calculate combined score for STRINGdb interactions
Description
Please note that all the interactions have duplicates as it's a two way interaction (score(ProteinA-Protein) == score(ProteinB, PorteinA))
Usage
.combinedScore(allInteractions, scoreThreshold, removeText)
Arguments
allInteractions |
table with score of all interactions |
scoreThreshold |
threshold to keep interactions |
removeText |
remove text-based interactions |
Details
To better understand how the score is calculated, please see: https://string-db.org/help/faq/#how-are-the-scores-computed
Value
table with combined score
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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