ensemblGeneNames: Retrieve ensembl gene names from biomaRt

In sysbiomed/glmSparseNet: Network Centrality Metrics for Elastic-Net Regularized Models

Retrieve ensembl gene names from biomaRt

Description

Retrieve ensembl gene names from biomaRt

Usage

ensemblGeneNames(
  geneId,
  useCache = TRUE,
  verbose = FALSE,
  gene.id = deprecated(),
  use.cache = deprecated()
)

Arguments

geneId	character vector with gene names
useCache	Boolean indicating if biomaRt cache should be used
verbose	When using biomaRt in webservice mode and setting verbose to TRUE, the XML query to the webservice will be printed.
gene.id
use.cache

Value

a dataframe with external gene names, ensembl_id

Examples

ensemblGeneNames(c("MOB1A", "RFLNB", "SPIC", "TP53"))

sysbiomed/glmSparseNet documentation built on Feb. 17, 2024, 1:38 p.m.