geneNames: Retrieve gene names from biomaRt

In sysbiomed/glmSparseNet: Network Centrality Metrics for Elastic-Net Regularized Models

Retrieve gene names from biomaRt

Description

Retrieve gene names from biomaRt

Usage

geneNames(
  ensemblGenes,
  useCache = TRUE,
  verbose = FALSE,
  ensembl.genes = deprecated(),
  use.cache = deprecated()
)

Arguments

ensemblGenes	character vector with gene names in ensembl_id format
useCache	Boolean indicating if biomaRt cache should be used
verbose	When using biomaRt in webservice mode and setting verbose to TRUE, the XML query to the webservice will be printed.
ensembl.genes
use.cache

Value

a dataframe with external gene names, ensembl_id

Examples

geneNames(c("ENSG00000114978", "ENSG00000166211", "ENSG00000183688"))

sysbiomed/glmSparseNet documentation built on Feb. 17, 2024, 1:38 p.m.