geneNames: Retrieve gene names from biomaRt

View source: R/external_apis.R

geneNamesR Documentation

Retrieve gene names from biomaRt

Description

Retrieve gene names from biomaRt

Usage

geneNames(
  ensemblGenes,
  useCache = TRUE,
  verbose = FALSE,
  ensembl.genes = deprecated(),
  use.cache = deprecated()
)

Arguments

ensemblGenes

character vector with gene names in ensembl_id format

useCache

Boolean indicating if biomaRt cache should be used

verbose

When using biomaRt in webservice mode and setting verbose to TRUE, the XML query to the webservice will be printed.

ensembl.genes

[Deprecated]

use.cache

[Deprecated]

Value

a dataframe with external gene names, ensembl_id

Examples

geneNames(c("ENSG00000114978", "ENSG00000166211", "ENSG00000183688"))

sysbiomed/glmSparseNet documentation built on Feb. 17, 2024, 1:38 p.m.