seqinfo-methods | R Documentation |
Methods for accessing and modifying
Seqinfo
object information stored in a
ChromatinAssay
object.
## S4 method for signature 'ChromatinAssay' seqinfo(x) ## S4 replacement method for signature 'ChromatinAssay' seqinfo(x) <- value ## S4 method for signature 'ChromatinAssay' seqlevels(x) ## S4 replacement method for signature 'ChromatinAssay' seqlevels(x) <- value ## S4 method for signature 'ChromatinAssay' seqnames(x) ## S4 replacement method for signature 'ChromatinAssay' seqnames(x) <- value ## S4 method for signature 'ChromatinAssay' seqlengths(x) ## S4 replacement method for signature 'ChromatinAssay' seqlengths(x) <- value ## S4 method for signature 'ChromatinAssay' genome(x) ## S4 replacement method for signature 'ChromatinAssay' genome(x) <- value ## S4 method for signature 'ChromatinAssay' isCircular(x) ## S4 replacement method for signature 'ChromatinAssay' isCircular(x) <- value ## S4 method for signature 'Seurat' seqinfo(x) ## S4 replacement method for signature 'Seurat' seqinfo(x) <- value ## S4 method for signature 'Seurat' seqlevels(x) ## S4 replacement method for signature 'Seurat' seqlevels(x) <- value ## S4 method for signature 'Seurat' seqnames(x) ## S4 replacement method for signature 'Seurat' seqnames(x) <- value ## S4 method for signature 'Seurat' seqlengths(x) ## S4 replacement method for signature 'Seurat' seqlengths(x) <- value ## S4 method for signature 'Seurat' genome(x) ## S4 replacement method for signature 'Seurat' genome(x) <- value ## S4 method for signature 'Seurat' isCircular(x) ## S4 replacement method for signature 'Seurat' isCircular(x) <- value
x |
A |
value |
A |
seqinfo(ChromatinAssay) <- value
: set method for ChromatinAssay objects
seqlevels(ChromatinAssay)
: get method for ChromatinAssay objects
seqlevels(ChromatinAssay) <- value
: set method for ChromatinAssay objects
seqnames(ChromatinAssay)
: get method for ChromatinAssay objects
seqnames(ChromatinAssay) <- value
: set method for ChromatinAssay objects
seqlengths(ChromatinAssay)
: get method for ChromatinAssay objects
seqlengths(ChromatinAssay) <- value
: set method for ChromatinAssay objects
genome(ChromatinAssay)
: get method for ChromatinAssay objects
genome(ChromatinAssay) <- value
: set method for ChromatinAssay objects
isCircular(ChromatinAssay)
: get method for ChromatinAssay objects
isCircular(ChromatinAssay) <- value
: set method for ChromatinAssay objects
seqinfo(Seurat)
: get method for Seurat objects
seqinfo(Seurat) <- value
: set method for Seurat objects
seqlevels(Seurat)
: get method for Seurat objects
seqlevels(Seurat) <- value
: set method for Seurat objects
seqnames(Seurat)
: get method for Seurat objects
seqnames(Seurat) <- value
: set method for Seurat objects
seqlengths(Seurat)
: get method for Seurat objects
seqlengths(Seurat) <- value
: set method for Seurat objects
genome(Seurat)
: get method for Seurat objects
genome(Seurat) <- value
: set method for Seurat objects
isCircular(Seurat)
: get method for Seurat objects
isCircular(Seurat) <- value
: set method for Seurat objects
seqinfo in the GenomeInfoDb package.
ChromatinAssay-class
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