biotypes: Get or set rowData(object), biotype columns in a...

In trichelab/velocessor: The world's dumbest single-cell RNA velocity calculator and loader

Description

Get or set rowData(object), biotype columns in a SummarizedExperiment

Usage

gene_biotype(object, ...)

## S4 method for signature 'SummarizedExperiment'
gene_biotype(object, ...)

gene_biotype(object, ...) <- value

## S4 replacement method for signature 'SummarizedExperiment'
gene_biotype(object, ...) <- value

transcript_biotype(object, ...)

## S4 method for signature 'SummarizedExperiment'
transcript_biotype(object, ...)

transcript_biotype(object, ...) <- value

## S4 replacement method for signature 'SummarizedExperiment'
transcript_biotype(object, ...) <- value

Arguments

object	a SummarizedExperiment
...	other arguments, as appropriate (which they rarely are)
value	value for rowData(object), biotype (replaces existing)

Details

GET_RD and SET_RD are aped from SingleCellExperiment.

Value

     result of getting/setting rowData(object)[, biotype]

trichelab/velocessor documentation built on Jan. 5, 2022, 6:27 p.m.