save_ordination_plots: Save Ordination Plots

In vallenderlab/MicrobiomeR: Analyze Microbiome Data

Description

This function saves ordination plots stored in a listlike object to an output folder.

Usage

save_ordination_plots(ord_plots, format = "tiff",
  start_path = "output", ...)

Arguments

ord_plots	An ordination plot list generated by ordination_plots.
format	The format of the output image. Default: 'tiff'
start_path	The starting path of the output directory. Default: 'output'
...	An optional list of parameters to use in the output_dir function.

Details

This function creates an appropriate output directory, where it saves publication ready plots.

Value

An output directory that contains ordination plots.

See Also

output_dir

ggsave

Other Visualizations: alpha_diversity_plot, correlation_data, correlation_plots, correlation_plot, heat_tree_parameters, heat_tree_plots, ordination_plots, ordination_plot, plot_limits, save_alpha_diversity_plots, save_correlation_plots, save_heat_tree_plots, save_stacked_barplots, stacked_barplots, stacked_barplot, top_coefficients_barplot

Examples

## Not run: 
if (interactive()) {
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## End(Not run)

vallenderlab/MicrobiomeR documentation built on Aug. 30, 2019, 11:24 p.m.