In wguo-research/scCancer: A package for automated processing of single cell RNA-seq data in cancer
r h.i.r h.ii.2 Ambient RNAs contamination fraction estimation
We refer to the algorithm of SoupX
to estimate the contamination fraction of ambient RNAs from lysed cells.
The estimated contamination fraction is %.
wguo-research/scCancer documentation built on May 26, 2024, 9:12 p.m.
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r h.i.r h.ii.2 Ambient RNAs contamination fraction estimation
We refer to the algorithm of SoupX
to estimate the contamination fraction of ambient RNAs from lysed cells.
The estimated contamination fraction is r results$contamination.frac * 100%.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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