Files in xiaowangCN/GeneDMRs
GeneDMRs: an R package for Gene-based differentially methylated regions analysis
.gitignore
DESCRIPTION
GeneDMRs.Rproj
GeneDMRs.pdf
LICENSE
NAMESPACE
R/Box_plot.R
R/Circos_plot.R
R/Correlation_plot.R
R/DMR_test.R
R/Enrich_plot.R
R/File_read.R
R/Heatmap_plot.R
R/Manhattan_plot.R
R/Methfile_QC.R
R/Methmean_match.R
R/Pie_plot.R
R/Quick_start.R
R/Venn_plot.R
R/Window_divide.R
README.md
man/Bedfile_read.Rd
man/Boxplot_trans.Rd
man/Chromosome_pieplot.Rd
man/Circos_plot.Rd
man/Correlation_plot.Rd
man/Cpgfeature_boxplot.Rd
man/Cytofile_read.Rd
man/DMC_feature.Rd
man/DMC_methfile_QC.Rd
man/Enrich_plot.Rd
man/Feature_pieplot.Rd
man/Genebody_cpgfeature_boxplot.Rd
man/Group_boxplot.Rd
man/Group_cpgfeature_boxplot.Rd
man/Heatmap_plot.Rd
man/Logic_regression.Rd
man/Manhattan_plot.Rd
man/Meth_difference.Rd
man/Meth_mean.Rd
man/Methfile_QC.Rd
man/Methfile_read.Rd
man/Methmean_region.Rd
man/Methmean_site.Rd
man/Pvalue_adjusted.Rd
man/Quick_DMCs.Rd
man/Quick_GeneDMRs.Rd
man/Regionfile_read.Rd
man/Sample_boxplot.Rd
man/Significant_filter.Rd
man/Venn_plot.Rd
man/Volcano_plot.Rd
man/Window_divide.Rd
man/chromosmoe_sort.Rd
man/refseqfile_check.Rd
methdata/1_1.gz
methdata/1_2.gz
methdata/1_3.gz
methdata/2_1.gz
methdata/2_2.gz
methdata/DEgenes.txt
methdata/cpgi.bed.txt
methdata/cytoBandIdeo.txt.gz
methdata/ffbase.7z
methdata/ffbase.zip
methdata/ffbase/DESCRIPTION
methdata/ffbase/INDEX
methdata/ffbase/MD5
methdata/ffbase/Meta/Rd.rds
methdata/ffbase/Meta/features.rds
methdata/ffbase/Meta/hsearch.rds
methdata/ffbase/Meta/links.rds
methdata/ffbase/Meta/nsInfo.rds
methdata/ffbase/Meta/package.rds
methdata/ffbase/NAMESPACE
methdata/ffbase/NEWS
methdata/ffbase/R/ffbase
methdata/ffbase/R/ffbase.rdb
methdata/ffbase/R/ffbase.rdx
methdata/ffbase/help/AnIndex
methdata/ffbase/help/aliases.rds
methdata/ffbase/help/ffbase.rdb
methdata/ffbase/help/ffbase.rdx
methdata/ffbase/help/paths.rds
methdata/ffbase/html/00Index.html
methdata/ffbase/html/R.css
methdata/ffbase/libs/i386/ffbase.dll
methdata/ffbase/libs/i386/symbols.rds
methdata/ffbase/libs/x64/ffbase.dll
methdata/ffbase/libs/x64/symbols.rds
methdata/genefeatureall_cpgfeature_Qvalue.Rdata
methdata/refseq.bed.txt
methdata/regiongeneall_Qvalue.Rdata
methdata/regiongeneall_cpgfeature_Qvalue.Rdata
methdata/regiongenebodyall_Qvalue.Rdata
methdata/regiongenebodyall_cpgfeature_Qvalue.Rdata
methdata/siteall_Qvalue.Rdata
methdata/siteall_significant_feature.Rdata
vignettes/GeneDMRs.Rmd
