RenameFactors: Function for renaming NMF factors to something more...

In yanwu2014/swne: Similarity Weighted Nonnegative Embedding: A method for visualizing high dimensional datasets

Function for renaming NMF factors to something more interpretable. If the NMF factor name is the empty string, "", then the NMF factor will not be plotted

Description

Function for renaming NMF factors to something more interpretable. If the NMF factor name is the empty string, "", then the NMF factor will not be plotted

Usage

RenameFactors(swne.embedding, name.mapping, set.empty = T)

Arguments

swne.embedding	List of NMF and sample coordinates from EmbedSWNE
set.empty	If true, any old NMF names that weren't renamed are set to the empty string
new.names	Named character vector with the old values as names and the new values as values

Value

SWNE embedding with NMFs renamed.

yanwu2014/swne documentation built on Aug. 5, 2023, 4:42 a.m.