network_from_ppi: Generate network from PPI-based result.
In ys-amms/bionexr: Integrative network-based analysis of cancer somatic mutation and expression data
Description
Usage
Arguments
Value
Examples
Description
Generate network from PPI-based result.
Usage
1
network_from_ppi(ppi_result, topn = 10)
Arguments
ppi_result
PPI-based analysis result.
topn
Default value is 10.
Value
A igraph object.
Examples
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## Not run:
prepare_ma()
res.gene <- perform_gene_ppi(hnsc_mut_part, hnsc_exp_part)
res.network <- perform_network_ppi(res.gene[[2]], res.gene[[3]])
g <- network_from_ppi(res.network)
## End(Not run)
ys-amms/bionexr documentation built on May 4, 2019, 5:33 p.m.
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Description Usage Arguments Value Examples
Description
Generate network from PPI-based result.
Usage
1 | network_from_ppi(ppi_result, topn = 10)
|
Arguments
ppi_result |
PPI-based analysis result. |
topn |
Default value is 10. |
Value
A igraph object.
Examples
1 2 3 4 5 6 7 8 | ## Not run:
prepare_ma()
res.gene <- perform_gene_ppi(hnsc_mut_part, hnsc_exp_part)
res.network <- perform_network_ppi(res.gene[[2]], res.gene[[3]])
g <- network_from_ppi(res.network)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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