plot_ppi: visualize PPI-based network.
In ys-amms/bionexr: Integrative network-based analysis of cancer somatic mutation and expression data
Description
Usage
Arguments
Examples
Description
Visualize PPI-based network, this function takes
network_from_ppi output as input.
Usage
1
Arguments
net
An igraph object.
...
Other parameters.
Examples
1
2
3
4
5
6
7
8
9
## Not run:
prepare_ma()
res.gene <- perform_gene_ppi(hnsc_mut_part, hnsc_exp_part)
res.network <- perform_network_ppi(res.gene[[2]], res.gene[[3]])
g <- network_from_ppi(res.network)
plot_ppi(g)
## End(Not run)
ys-amms/bionexr documentation built on May 4, 2019, 5:33 p.m.
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Description Usage Arguments Examples
Description
Visualize PPI-based network, this function takes
network_from_ppi output as input.
Usage
1 |
Arguments
net |
An igraph object. |
... |
Other parameters. |
Examples
1 2 3 4 5 6 7 8 9 | ## Not run:
prepare_ma()
res.gene <- perform_gene_ppi(hnsc_mut_part, hnsc_exp_part)
res.network <- perform_network_ppi(res.gene[[2]], res.gene[[3]])
g <- network_from_ppi(res.network)
plot_ppi(g)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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