Description Usage Arguments Examples
Visualized pathway-based network, this function takes
network_from_significant_branches
output as input.
1 | plot_pathway(net, ...)
|
net |
An igraph object. |
... |
Other parameters. |
1 2 3 4 5 6 7 8 9 10 | ## Not run:
prepare_ma()
res.gene <- perform_gene_pathway(hnsc_mut_part, hnsc_exp_part)
res.network <- perform_network_pathway(res.gene[[2]], res.gene[[3]], hnsc_expressed_genes)
g <- network_from_significant_branches(res.network)
plot_pathway(g)
## End(Not run)
|
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