hlaCheckAllele: Check SNP alleles
In zhengxwen/HIBAG: HLA Genotype Imputation with Attribute Bagging
View source: R/DataUtilities.R
hlaCheckAllele R Documentation
Check SNP alleles
Description
Check SNP reference and non-reference alleles.
Usage
hlaCheckAllele(allele1, allele2)
Arguments
allele1
two alleles for the first individual, like
c("A/G", "C/G")
allele2
two alleles for the second individual, like
c("A/G", "C/G")
Value
Return a logical vector, where TRUE indicates the alleles are
matching at that locus.
Author(s)
Xiuwen Zheng
See Also
hlaCheckSNPs
Examples
hlaCheckAllele(c("A/G", "T/G", "0/A"), c("G/A", "C/A", "G/0"))
zhengxwen/HIBAG documentation built on April 16, 2024, 8:41 a.m.
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View source: R/DataUtilities.R
| hlaCheckAllele | R Documentation |
Check SNP alleles
Description
Check SNP reference and non-reference alleles.
Usage
hlaCheckAllele(allele1, allele2)
Arguments
allele1 |
two alleles for the first individual, like
|
allele2 |
two alleles for the second individual, like
|
Value
Return a logical vector, where TRUE indicates the alleles are
matching at that locus.
Author(s)
Xiuwen Zheng
See Also
hlaCheckSNPs
Examples
hlaCheckAllele(c("A/G", "T/G", "0/A"), c("G/A", "C/A", "G/0"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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