hlaLociInfo: HLA/KIR Locus Information
In zhengxwen/HIBAG: HLA Genotype Imputation with Attribute Bagging
View source: R/DataUtilities.R
hlaLociInfo R Documentation
HLA/KIR Locus Information
Description
To get the starting and ending positions in basepair of HLA/KIR loci.
Usage
hlaLociInfo(assembly=c("auto", "auto-silent", "hg18", "hg19", "hg38",
"unknown"))
Arguments
assembly
the human genome reference: "hg18", "hg19" (default),
"hg38"; "auto" refers to "hg19"; "auto-silent" refers to "hg19" without
any warning
Value
Return a data frame include the genomic locations.
Author(s)
Xiuwen Zheng
References
NCBI Resources: https://www.ncbi.nlm.nih.gov/gene,
HLA Nomenclature: http://hla.alleles.org/genes/index.html
Examples
hlaLociInfo()
zhengxwen/HIBAG documentation built on April 16, 2024, 8:41 a.m.
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View source: R/DataUtilities.R
| hlaLociInfo | R Documentation |
HLA/KIR Locus Information
Description
To get the starting and ending positions in basepair of HLA/KIR loci.
Usage
hlaLociInfo(assembly=c("auto", "auto-silent", "hg18", "hg19", "hg38",
"unknown"))
Arguments
assembly |
the human genome reference: "hg18", "hg19" (default), "hg38"; "auto" refers to "hg19"; "auto-silent" refers to "hg19" without any warning |
Value
Return a data frame include the genomic locations.
Author(s)
Xiuwen Zheng
References
NCBI Resources: https://www.ncbi.nlm.nih.gov/gene, HLA Nomenclature: http://hla.alleles.org/genes/index.html
Examples
hlaLociInfo()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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