Description Usage Arguments Value
This will find the value of s that will result in the time term of TSD being approximately equal to the distance term
1 2 3 4 5 6 7 8 9 | lxy.plot.sfinder(lxy, id = NULL, delta.t = "auto",
delta.t.auto.n = 8, delta.t.err = 0.01, outline = FALSE,
desc = c(0, 1, 3)[2], cex.desc = 0.8, col.desc = "darkgreen",
time.term = c("vmax", "dif")[1], mar = c(3, 3, if (title.show) 2.8
else 0.7, 0.5), mgp = c(1.8, 0.5, 0), figs.per.page = NULL,
title = NULL, title.show = TRUE, panel.num = NULL,
panel.num.inside.plot = !title.show, png.dir = NULL,
png.dir.make = TRUE, png.width = 800, png.height = png.width,
png.overwrite = TRUE, png.pointsize = 12 + (png.width - 480)/80, ...)
|
lxy |
A LoCoH-xy object |
id |
The id(s) of the individual(s) to include in the plot |
delta.t |
numeric vector of delta.t values (in seconds) for which a s-values will be computed. Can also be 'auto' in which case |
delta.t.auto.n |
The number of delta-ts to use when delta.t="auto" |
delta.t.err |
The proportion of delta.t within which the interval between two points must fall to be included in the plot |
outline |
Show outliers in the box plots T/F |
desc |
Which side to display automatically generated desciptive text (e.g. caption). 0=none, 1=bottom, 3=top. |
cex.desc |
The expansion factor for the descriptive text. Numeric value. |
col.desc |
The color of the descriptive text. Color value. |
time.term |
The type of time term to use ('vmax' is computed as deltaT * maximum possible velocity, while 'dif' computes Gauusian diffusion distance) |
mar |
The plot margins. A four item numeric vector |
mgp |
The distance away from the edge of the plot for the 1) label, 2) tick marks, and 3) axis line. A three-item numeric vector |
figs.per.page |
The number of plots per page. |
title |
The title to be displayed. Character. If NULL a title will be constructed. |
title.show |
Whether to show the title. T/F. |
panel.num |
A number or letter to display in the upper left hand corner of the plot when the plot will be used as part of a multi-frame graphic (as in publications). Character |
panel.num.inside.plot |
Whether to display panel.num inside the plot area itself, as opposed to the title area. T/F |
png.dir |
The directory for a PNG file (filename will be constructed automatically). Ignored if png.fn is passed |
png.dir.make |
Whether to create png.dir if it doesn't exist. T/F |
png.width |
The width of the PNG image |
png.height |
The height of the PNG image |
png.overwrite |
Whether to overwrite an existing PNG file if it exists. T/F |
png.pointsize |
The pointsize (in pixels) for the PNG image, equivalent to the height or width of a character in pixels (increase to make labels appear larger) |
... |
Additional parameters that will be passed to the |
A list of lists, one for each plot containing the filename (NULL if no png made), the image dimensions (or NULL), the descriptive text, the id, and a list of the svals
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