subsetAssayNames: Name retrieval method for all subset assays in...

In ExperimentSubset: Manages subsets of data with Bioconductor Experiment objects

Description

Retrieves the names of all the subsets as well as the subset assays.

Usage

subsetAssayNames(object)

## S4 method for signature 'ExperimentSubset'
subsetAssayNames(object)

Arguments

object

ExperimentSubset Input ExperimentSubset object.

Value

A vector containing the names of the subsets and the subset assays available in the input ExperimentSubset object.

Examples

data(sce_chcl, package = "scds")
es <- ExperimentSubset(sce_chcl)
es <- createSubset(es, "subset1",
rows = c(10,11,50,56,98,99,102,105,109, 200),
cols = c(20,21,40,45,90,99,100,123,166,299),
parentAssay = "counts")
assay(es, "subset1",
subsetAssayName = "subset1pAssay") <- assay(es, "subset1")[,] + 1
subsetAssayNames(es)

ExperimentSubset documentation built on Nov. 8, 2020, 5:03 p.m.