colnames-set: Setter method for colnames in ExperimentSubset objects

In ExperimentSubset: Manages subsets of data with Bioconductor Experiment objects

Description

Set colnames to an ExperimentSubset object or a subset in the ExperimentSubset object or any object supported by colnames in base package.

Usage

colnames(object, ...) <- value

## S4 replacement method for signature 'ANY'
colnames(object, subsetName, ...) <- value

Arguments

object	ExperimentSubset Input ExperimentSubset object or any object supported by colnames in base package.
...	Additional parameters and subsetName parameter to pass the name of the subset to get colnames from.
value	list() A list of colnames to set to the input object.
subsetName	character(1) Name of the subset to get colnames from. If missing, colnames from main object are returned.

Value

Input object with colnames set.

Examples

data(sce_chcl, package = "scds")
es <- ExperimentSubset(sce_chcl)
es <- createSubset(es, "subset1",
rows = c(10,11,50,56,98,99,102,105,109, 200),
cols = c(20,21,40,45,90,99,100,123,166,299),
parentAssay = "counts")
colnames(es, subsetName = "subset1") <-
paste0("col", seq(subsetDim(es, subsetName = "subset1")[2]))

ExperimentSubset documentation built on Nov. 8, 2020, 5:03 p.m.