rownames-set: Setter method for rownames in ExperimentSubset objects

In ExperimentSubset: Manages subsets of data with Bioconductor Experiment objects

Description

Set rownames to an ExperimentSubset object or a subset in the ExperimentSubset object or any object supported by rownames in base package.

Usage

rownames(object, ...) <- value

## S4 replacement method for signature 'ANY'
rownames(object, subsetName, ...) <- value

Arguments

object	ExperimentSubset Input ExperimentSubset object or any object supported by rownames in base package.
...	Additional parameters and subsetName parameter to pass the name of the subset to get rownames from.
value	codelist() A list of rownames to set to the input object.
subsetName	character(1) Name of the subset to get rownames from. If missing, rownames from main object are returned.

Value

Input object with rownames set.

Examples

data(sce_chcl, package = "scds")
es <- ExperimentSubset(sce_chcl)
es <- createSubset(es, "subset1",
rows = c(10,11,50,56,98,99,102,105,109, 200),
cols = c(20,21,40,45,90,99,100,123,166,299),
parentAssay = "counts")
rownames(es, subsetName = "subset1") <-
paste0("row", seq(subsetDim(es, subsetName = "subset1")[1]))

ExperimentSubset documentation built on Nov. 8, 2020, 5:03 p.m.