ExperimentSubset: Manages subsets of data with Bioconductor Experiment objects

Experiment objects such as the SummarizedExperiment or SingleCellExperiment are data containers for one or more matrix-like assays along with the associated row and column data. Often only a subset of the original data is needed for down-stream analysis. For example, filtering out poor quality samples will require excluding some columns before analysis. The ExperimentSubset object is a container to efficiently manage different subsets of the same data without having to make separate objects for each new subset.

Package details

AuthorIrzam Sarfraz [aut, cre] (<https://orcid.org/0000-0001-8121-792X>), Muhammad Asif [aut, ths] (<https://orcid.org/0000-0003-1839-2527>), Joshua D. Campbell [aut] (<https://orcid.org/0000-0003-0780-8662>)
Bioconductor views DataImport DataRepresentation Infrastructure Software
MaintainerIrzam Sarfraz <irzam9095@gmail.com>
LicenseMIT + file LICENSE
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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ExperimentSubset documentation built on Nov. 8, 2020, 5:03 p.m.