Description Usage References Examples
'KcViab_Norm' is a normalized cellHTS object (KcViab_Norm) generated from a genome-wide RNAi screen of cell viability in Drosophila Kc167 cells (see help(KcViab)).
'KcViab_Data4Enrich' is a vector of phenotypes summarized and preprocessed from 'KcViab_Norm' (see section 4.1 of the vignette of package HTSanalyzeR for details).
'KcViab_PVals' is a vector of p-values generated by statistical tests for the summarized data of 'KcViab_Norm' (see section 5.1 of the vignetted of package HTSanalyzeR for details).
'KcViab_GSCA' is an object of class 'GSCA' (Gene Set Collection Analysis) (see section 4.2 of the vignette of package HTSanalyzeR for details).
'KcViab_NWA' is an object of class 'NWA' (NetWork Analysis) (see section 5.2 of the vignetted of package HTSanalyzeR for details).
'Biogrid_DM_Interactome' is an object of class graphNEL built from the interaction data set for Drosophila Melanogaster downloaded from the BioGRID database (version 3.1.71, accessed on Dec. 5, 2010).
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Boutros, M., Kiger, A.A., Armknecht,S., Kerr,K., Hild,M., Koch,B., Haas, S.A., Heidelberg Fly Array Consortium, Paro,R. and Perrimon, N. (2004) Genome-wide RNAi analysis of growth and viability in Drosophila cells, Science 303:832–5.
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