Description Usage References Examples

'KcViab_Norm' is a normalized cellHTS object (KcViab_Norm)
generated from a genome-wide RNAi screen of cell viability in
*Drosophila* Kc167 cells (see help(KcViab)).

'KcViab_Data4Enrich' is a vector of phenotypes summarized
and preprocessed from 'KcViab_Norm' (see section 4.1 of the
vignette of package *HTSanalyzeR* for details).

'KcViab_PVals' is a vector of p-values generated by statistical
tests for the summarized data of 'KcViab_Norm' (see section 5.1
of the vignetted of package *HTSanalyzeR* for details).

'KcViab_GSCA' is an object of class 'GSCA' (Gene Set Collection
Analysis) (see section 4.2 of the vignette of package *HTSanalyzeR*
for details).

'KcViab_NWA' is an object of class 'NWA' (NetWork Analysis) (see
section 5.2 of the vignetted of package *HTSanalyzeR* for
details).

'Biogrid_DM_Interactome' is an object of class *graphNEL* built from
the interaction data set for *Drosophila Melanogaster* downloaded
from the *BioGRID* database (version 3.1.71, accessed on Dec. 5, 2010).

1 | ```
##see examples for details
``` |

Boutros, M., Kiger, A.A., Armknecht,S., Kerr,K., Hild,M., Koch,B., Haas,
S.A., Heidelberg Fly Array Consortium, Paro,R. and Perrimon, N. (2004)
Genome-wide RNAi analysis of growth and viability in Drosophila cells,
*Science* **303**:832–5.

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HTSanalyzeR documentation built on May 2, 2018, 4:30 a.m.

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