API for MAGeCKFlute
Integrative analysis pipeline for pooled CRISPR functional genetic screens

Global functions
.onAttach Source code
.onLoad Source code
BarView Man page Source code
BatchRemove Man page Source code
ConsistencyView Man page Source code
CutoffCalling Man page Source code
DensityDiffView Man page Source code
DensityView Man page Source code
EnrichAB Man page Source code
EnrichAnalyzer Man page Source code
EnrichSquare Man page Source code
EnrichedFilter Man page Source code
EnrichedGeneView Man page Source code
EnrichedView Man page Source code
FluteMLE Man page Source code
FluteRRA Man page Source code
GSEA Man page
HeatmapView Man page Source code
Hypergeometric Man page
IdentBarView Man page Source code
IncorporateDepmap Man page Source code
KeggPathwayView Man page
MAView Man page Source code
MapRatesView Man page Source code
NormalizeBeta Man page Source code
OmitCommonEssential Man page Source code
RRApipeline Man page
RankView Man page Source code
ReadBeta Man page Source code
ReadGMT Man page Source code
ReadRRA Man page Source code
ReadsgRRA Man page Source code
ResembleDepmap Man page Source code
ScatterView Man page Source code
Selector Man page Source code
SquareView Man page Source code
TransGeneID Man page Source code
ViolinView Man page Source code
VolcanoView Man page Source code
Zuber_Essential Man page
arrangePathview Man page Source code
cnetplot Man page
countsummary Man page
dotplot Man page
emapplot Man page
enrich.GSE Man page Source code
enrich.HGT Man page Source code
enrich.ORT Man page Source code
enrichGSE Man page
enrichORT Man page
enricher Man page
enrichment Man page
flutemle Man page
getCols Man page Source code
getGeneAnn Man page Source code
getOrg Man page Source code
getOrtAnn Man page Source code
goplot Man page
gsGetter Man page Source code
gseaplot Man page
gseaplot2 Man page
hclustView Man page Source code
heatplot Man page
loess.normalize Man page
mle.gene_summary Man page
noEnrichPlot Man page Source code
normalize.loess Man page Source code
normalizebeta Man page
rankview Man page
readbeta Man page
readrra Man page
reexports Man page
retrieve_gs Man page Source code
ridgeplot Man page
rra.gene_summary Man page
rra.sgrna_summary Man page
sgRankView Man page Source code
squareview Man page
transGeneID Man page
violinview Man page
writeGMT Man page Source code
MAGeCKFlute documentation built on March 31, 2020, 6:20 p.m.