API for RCy3
Functions to Access and Control Cytoscape
| Global functions | |
|---|---|
| .CyndexBaseUrl | Source code |
| .FastAppendListGlobal | Source code |
| .checkHexColor | Source code |
| .checkOpacity | Source code |
| .checkPanelName | Source code |
| .checkSelected | Source code |
| .checkSlot | Source code |
| .command2getQuery | Source code |
| .command2postQueryBody | Source code |
| .command2postQueryUrl | Source code |
| .cyError | Source code |
| .cyFinally | Source code |
| .cyPalette | Source code |
| .cyWarnings | Source code |
| .edgeNameToEdgeSUID | Source code |
| .edgeSUIDToEdgeName | Source code |
| .edgeSet2JSON | Source code |
| .getFilterJson | Source code |
| .nodeNameToNodeSUID | Source code |
| .nodeSUIDToNodeName | Source code |
| .nodeSet2JSON | Source code |
| .postCreateFilter | Source code |
| .prepGetQueryArgs | Source code |
| .prepPostQueryLists | Source code Source code |
| .tableColumnExists | Source code |
| .verifySupportedVersions | Source code |
| AddToGroup | Man page Source code |
| RCy3 | Man page |
| RemoveFromGroup | Man page Source code |
| addCyEdges | Man page |
| addCyNodes | Man page Source code |
| analyzeNetwork | Man page Source code |
| applyFilter | Man page Source code |
| bundleEdges | Man page Source code |
| clearEdgeBends | Man page Source code |
| clearEdgePropertyBypass | Man page Source code |
| clearNetworkCenterBypass | Man page Source code |
| clearNetworkPropertyBypass | Man page Source code |
| clearNetworkZoomBypass | Man page Source code |
| clearNodeOpacityBypass | Man page |
| clearNodePropertyBypass | Man page Source code |
| clearSelection | Man page Source code |
| cloneNetwork | Man page Source code |
| closeSession | Man page Source code |
| collapseGroup | Man page Source code |
| commandEcho | Man page Source code |
| commandOpenDialog | Man page Source code |
| commandPause | Man page Source code |
| commandQuit | Man page Source code |
| commandRunFile | Man page Source code |
| commandSleep | Man page Source code |
| commandsAPI | Man page Source code |
| commandsGET | Man page Source code |
| commandsHelp | Man page Source code |
| commandsPOST | Man page Source code |
| commandsRun | Man page Source code |
| copyVisualStyle | Man page |
| createColumnFilter | Man page Source code |
| createCompositeFilter | Man page Source code |
| createDegreeFilter | Man page Source code |
| createGraphFromNetwork | Man page |
| createGroup | Man page Source code |
| createGroupByColumn | Man page Source code |
| createIgraphFromNetwork | Man page Source code |
| createNetworkFromDataFrames | Man page Source code |
| createNetworkFromGraph | Man page |
| createNetworkFromIgraph | Man page Source code |
| createSubnetwork | Man page Source code |
| createVisualStyle | Man page Source code |
| cybrowserClose | Man page Source code |
| cybrowserDialog | Man page Source code |
| cybrowserHide | Man page Source code |
| cybrowserList | Man page Source code |
| cybrowserSend | Man page Source code |
| cybrowserShow | Man page Source code |
| cybrowserVersion | Man page Source code |
| cyrestAPI | Man page Source code |
| cyrestDELETE | Man page Source code |
| cyrestGET | Man page Source code |
| cyrestPOST | Man page Source code |
| cyrestPUT | Man page Source code |
| cytoscapeApiVersions | Man page Source code |
| cytoscapeFreeMemory | Man page Source code |
| cytoscapeMemoryStatus | Man page Source code |
| cytoscapeNumberOfCores | Man page Source code |
| cytoscapePing | Man page Source code |
| cytoscapeVersionInfo | Man page Source code |
| deleteAllNetworks | Man page |
| deleteDuplicateEdges | Man page Source code |
| deleteGroup | Man page Source code |
| deleteNetwork | Man page |
| deleteSelectedEdges | Man page Source code |
| deleteSelectedNodes | Man page Source code |
| deleteSelfLoops | Man page Source code |
| deleteStyleMapping | Man page Source code |
| deleteTableColumn | Man page Source code |
| deleteVisualStyle | Man page Source code |
| diffusionAdvanced | Man page Source code |
| diffusionBasic | Man page Source code |
| disableApp | Man page |
| dockPanel | Man page Source code |
| enableApp | Man page |
| expandGroup | Man page Source code |
| exportFilters | Man page Source code |
| exportImage | Man page Source code |
| exportNetwork | Man page |
| exportNetworkToNDEx | Man page Source code |
| exportVisualStyles | Man page Source code |
| fitContent | Man page Source code |
| floatPanel | Man page Source code |
| getAllEdges | Man page Source code |
| getAllNodes | Man page Source code |
| getAppInformation | Man page |
| getAppStatus | Man page |
| getAppUpdates | Man page |
| getArrowShapes | Man page Source code |
| getAvailableApps | Man page |
| getBackgroundColorDefault | Man page Source code |
| getCollectionList | Man page Source code |
| getCollectionName | Man page Source code |
| getCollectionNetworks | Man page Source code |
| getCollectionSuid | Man page Source code |
| getCurrentStyle | Man page Source code |
| getDisabledApps | Man page |
| getEdgeColor | Man page |
| getEdgeCount | Man page Source code |
| getEdgeInfo | Man page Source code |
| getEdgeLineStyle | Man page |
| getEdgeLineWidth | Man page |
| getEdgeProperty | Man page Source code |
| getEdgeSelectionColorDefault | Man page Source code |
| getEdgeTargetArrowShape | Man page |
| getFilterList | Man page Source code |
| getFirstNeighbors | Man page |
| getGroupInfo | Man page Source code |
| getInstalledApps | Man page |
| getLayoutNameMapping | Man page Source code |
| getLayoutNames | Man page Source code |
| getLayoutPropertyNames | Man page Source code |
| getLayoutPropertyType | Man page Source code |
| getLayoutPropertyValue | Man page |
| getLineStyles | Man page Source code |
| getNetworkCenter | Man page Source code |
| getNetworkCount | Man page Source code |
| getNetworkList | Man page Source code |
| getNetworkNDExId | Man page Source code |
| getNetworkName | Man page Source code |
| getNetworkProperty | Man page Source code |
| getNetworkSuid | Man page Source code |
| getNetworkViewSuid | Man page Source code |
| getNetworkViews | Man page Source code |
| getNetworkZoom | Man page Source code |
| getNodeColor | Man page |
| getNodeCount | Man page Source code |
| getNodeHeight | Man page |
| getNodePosition | Man page |
| getNodeProperty | Man page Source code |
| getNodeSelectionColorDefault | Man page Source code |
| getNodeShapes | Man page |
| getNodeSize | Man page |
| getNodeWidth | Man page |
| getSelectedEdgeCount | Man page Source code |
| getSelectedEdges | Man page |
| getSelectedNodeCount | Man page Source code |
| getSelectedNodes | Man page Source code |
| getStyleDependencies | Man page Source code |
| getTableColumnNames | Man page Source code |
| getTableColumnTypes | Man page Source code |
| getTableColumns | Man page Source code |
| getTableValue | Man page Source code |
| getUninstalledApps | Man page |
| getVisualPropertyDefault | Man page Source code |
| getVisualPropertyNames | Man page |
| getVisualStyleNames | Man page Source code |
| hideAllPanels | Man page Source code |
| hideEdges | Man page |
| hideNodes | Man page Source code |
| hidePanel | Man page Source code |
| hideSelectedEdges | Man page |
| hideSelectedNodes | Man page |
| importFilters | Man page Source code |
| importNetworkFromFile | Man page Source code |
| importNetworkFromNDEx | Man page |
| importVisualStyles | Man page Source code |
| installApp | Man page |
| invertEdgeSelection | Man page Source code |
| invertNodeSelection | Man page Source code |
| layoutCopycat | Man page Source code |
| layoutNetwork | Man page Source code |
| listGroups | Man page Source code |
| loadTableData | Man page Source code |
| lockNodeDimensions | Man page |
| makeSimpleGraph | Man page Source code |
| makeSimpleIgraph | Man page Source code |
| mapTableColumn | Man page Source code |
| mapVisualProperty | Man page Source code |
| matchArrowColorToEdge | Man page |
| mergeNetworks | Man page Source code |
| openAppStore | Man page |
| openSession | Man page Source code |
| removeNodeCustomGraphics | Man page Source code |
| renameNetwork | Man page Source code |
| renameTableColumn | Man page Source code |
| saveSession | Man page Source code |
| selectAllEdges | Man page Source code |
| selectAllNodes | Man page Source code |
| selectEdges | Man page Source code |
| selectEdgesAdjacentToSelectedNodes | Man page Source code |
| selectEdgesConnectingSelectedNodes | Man page Source code |
| selectFirstNeighbors | Man page Source code |
| selectNodes | Man page Source code |
| selectNodesConnectedBySelectedEdges | Man page Source code |
| setBackgroundColorDefault | Man page Source code |
| setCurrentNetwork | Man page Source code |
| setCurrentView | Man page Source code |
| setEdgeColorBypass | Man page |
| setEdgeColorDefault | Man page Source code |
| setEdgeColorMapping | Man page |
| setEdgeFontFaceBypass | Man page Source code |
| setEdgeFontFaceDefault | Man page Source code |
| setEdgeFontFaceMapping | Man page Source code |
| setEdgeFontSizeBypass | Man page Source code |
| setEdgeFontSizeDefault | Man page Source code |
| setEdgeFontSizeMapping | Man page |
| setEdgeLabelBypass | Man page Source code |
| setEdgeLabelColorBypass | Man page |
| setEdgeLabelColorDefault | Man page Source code |
| setEdgeLabelColorMapping | Man page |
| setEdgeLabelDefault | Man page Source code |
| setEdgeLabelMapping | Man page |
| setEdgeLabelOpacityBypass | Man page Source code |
| setEdgeLabelOpacityDefault | Man page Source code |
| setEdgeLabelOpacityMapping | Man page Source code |
| setEdgeLineStyleBypass | Man page Source code |
| setEdgeLineStyleDefault | Man page Source code |
| setEdgeLineStyleMapping | Man page |
| setEdgeLineWidthBypass | Man page Source code |
| setEdgeLineWidthDefault | Man page Source code |
| setEdgeLineWidthMapping | Man page |
| setEdgeOpacityBypass | Man page |
| setEdgeOpacityDefault | Man page Source code |
| setEdgeOpacityMapping | Man page |
| setEdgePropertyBypass | Man page Source code |
| setEdgeSelectionColorDefault | Man page Source code |
| setEdgeSourceArrowColorBypass | Man page Source code |
| setEdgeSourceArrowColorDefault | Man page Source code |
| setEdgeSourceArrowColorMapping | Man page |
| setEdgeSourceArrowMapping | Man page |
| setEdgeSourceArrowShapeBypass | Man page Source code |
| setEdgeSourceArrowShapeDefault | Man page Source code |
| setEdgeSourceArrowShapeMapping | Man page |
| setEdgeTargetArrowColorBypass | Man page Source code |
| setEdgeTargetArrowColorDefault | Man page Source code |
| setEdgeTargetArrowColorMapping | Man page |
| setEdgeTargetArrowMapping | Man page |
| setEdgeTargetArrowShapeBypass | Man page |
| setEdgeTargetArrowShapeDefault | Man page Source code |
| setEdgeTargetArrowShapeMapping | Man page |
| setEdgeTooltipBypass | Man page |
| setEdgeTooltipDefault | Man page Source code |
| setEdgeTooltipMapping | Man page |
| setLayoutProperties | Man page |
| setNetworkCenterBypass | Man page Source code |
| setNetworkPropertyBypass | Man page Source code |
| setNetworkZoomBypass | Man page Source code |
| setNodeBorderColorBypass | Man page |
| setNodeBorderColorDefault | Man page Source code |
| setNodeBorderColorMapping | Man page |
| setNodeBorderOpacityBypass | Man page |
| setNodeBorderOpacityDefault | Man page Source code |
| setNodeBorderOpacityMapping | Man page Source code |
| setNodeBorderWidthBypass | Man page |
| setNodeBorderWidthDefault | Man page Source code |
| setNodeBorderWidthMapping | Man page |
| setNodeColorBypass | Man page |
| setNodeColorDefault | Man page Source code |
| setNodeColorMapping | Man page |
| setNodeComboOpacityMapping | Man page |
| setNodeCustomBarChart | Man page Source code |
| setNodeCustomBoxChart | Man page Source code |
| setNodeCustomHeatMapChart | Man page Source code |
| setNodeCustomLineChart | Man page Source code |
| setNodeCustomLinearGradient | Man page Source code |
| setNodeCustomPieChart | Man page Source code |
| setNodeCustomPosition | Man page Source code |
| setNodeCustomRadialGradient | Man page Source code |
| setNodeCustomRingChart | Man page Source code |
| setNodeFillOpacityBypass | Man page |
| setNodeFillOpacityDefault | Man page Source code |
| setNodeFillOpacityMapping | Man page Source code |
| setNodeFontFaceBypass | Man page Source code |
| setNodeFontFaceDefault | Man page Source code |
| setNodeFontFaceMapping | Man page Source code |
| setNodeFontSizeBypass | Man page Source code |
| setNodeFontSizeDefault | Man page Source code |
| setNodeFontSizeMapping | Man page |
| setNodeHeightBypass | Man page |
| setNodeHeightDefault | Man page Source code |
| setNodeHeightMapping | Man page |
| setNodeLabelBypass | Man page Source code |
| setNodeLabelColorBypass | Man page |
| setNodeLabelColorDefault | Man page Source code |
| setNodeLabelColorMapping | Man page |
| setNodeLabelDefault | Man page Source code |
| setNodeLabelMapping | Man page |
| setNodeLabelOpacityBypass | Man page |
| setNodeLabelOpacityDefault | Man page Source code |
| setNodeLabelOpacityMapping | Man page Source code |
| setNodeOpacityBypass | Man page |
| setNodePropertyBypass | Man page Source code |
| setNodeSelectionColorDefault | Man page Source code |
| setNodeShapeBypass | Man page |
| setNodeShapeDefault | Man page Source code |
| setNodeShapeMapping | Man page |
| setNodeSizeBypass | Man page |
| setNodeSizeDefault | Man page Source code |
| setNodeSizeMapping | Man page |
| setNodeTooltipBypass | Man page Source code |
| setNodeTooltipDefault | Man page Source code |
| setNodeTooltipMapping | Man page |
| setNodeWidthBypass | Man page |
| setNodeWidthDefault | Man page Source code |
| setNodeWidthMapping | Man page |
| setStyleDependencies | Man page Source code |
| setVisualPropertyDefault | Man page Source code |
| setVisualStyle | Man page Source code |
| syncNodeCustomGraphicsSize | Man page |
| toggleGraphicsDetails | Man page |
| unhideAll | Man page Source code |
| unhideEdges | Man page |
| unhideNodes | Man page Source code |
| uninstallApp | Man page |
| updateApp | Man page |
| updateNetworkInNDEx | Man page Source code |
| updateStyleDefaults | Man page Source code |
| updateStyleMapping | Man page Source code |
