This package is a pipeline to identify the key gene regulators in a biological process, for example in cell differentiation and in cell development after stimulation. There are four major steps in this pipeline: (1) differential expression analysis; (2) regulator-target network inference; (3) enrichment analysis; and (4) regulators scoring and ranking.
|Author||Weiyang Tao [cre, aut], Aridaman Pandit [aut]|
|Bioconductor views||DifferentialExpression FunctionalPrediction GeneExpression GeneSetEnrichment GeneTarget Network NetworkEnrichment NetworkInference RNASeq Transcription Transcriptomics TwoChannel|
|Maintainer||Weiyang Tao <email@example.com>|
|License||GPL (>= 2)|
|Package repository||View on Bioconductor|
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