RegEnrich: Gene regulator enrichment analysis

This package is a pipeline to identify the key gene regulators in a biological process, for example in cell differentiation and in cell development after stimulation. There are four major steps in this pipeline: (1) differential expression analysis; (2) regulator-target network inference; (3) enrichment analysis; and (4) regulators scoring and ranking.

Package details

AuthorWeiyang Tao [cre, aut], Aridaman Pandit [aut]
Bioconductor views DifferentialExpression FunctionalPrediction GeneExpression GeneSetEnrichment GeneTarget Network NetworkEnrichment NetworkInference RNASeq Transcription Transcriptomics TwoChannel
MaintainerWeiyang Tao <>
LicenseGPL (>= 2)
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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RegEnrich documentation built on March 7, 2021, 2 a.m.