Description Usage Arguments Value Author(s)
View source: R/main_splinter.R
Gives detailed description of splicing event in terms of splicing outcome post translation. Currently supports exon skipping and intron retention events.
1 2 3 4 5 6 7 8 | annotateEvents(
thedata,
db,
bsgenome,
outputdir,
full_output = FALSE,
output_prefix = "results"
)
|
thedata |
list. output of extractSpliceEvents. |
db |
TxDb object |
bsgenome |
BSGenome object |
outputdir |
character. relative output directory to current location. |
full_output |
logical. writes out detailed text report and generate figures. |
output_prefix |
character. text prefix for full_output files. |
list containing information on (1) data.frame with splicing regions (2) splice event type
Diana LOW
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