Description Usage Arguments Value Author(s) Examples
get DNA sequence give a region of interest
1 | getRegionDNA(roi, genome, introns = FALSE)
|
roi |
|
genome |
BSgenome object |
introns |
TRUE/FALSE. whether to include intronic (lowercase) DNA. By default returns only exonic (uppercase) DNA. |
list of
(1) DNA sequence
(2) Junction start (for primer design)
Diana Low
1 2 3 | suppressMessages(library(BSgenome.Mmusculus.UCSC.mm9))
bsgenome<-BSgenome.Mmusculus.UCSC.mm9
getRegionDNA(roi,bsgenome)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.