splitPCRhit: splitPCRhit

Description Usage Arguments Value Author(s) Examples

View source: R/primerpcr.R

Description

splits the PCR alignment into the two AS conditions

Usage

1
splitPCRhit(res, hitlist)

Arguments

res

result from getPCRsizes

hitlist

findCompatibleEvents object

Value

list of 2 data.frame objects with isoform name (ID) and length of PCR product (bp) matching Type 1 or Type 2 transcripts

Author(s)

Diana Low

Examples

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3
## as getPCRsizes gives you all PCR bands when the primers are used,
## splitPCRhit will determine which bands are relevant to the target
relevant_pcr_bands<-splitPCRhit(pcr_result1,compatible_tx)

SPLINTER documentation built on Nov. 8, 2020, 8:13 p.m.