binarizeData: Binarize Sequencing data with the default ChromHMM...
In STAN: The Genomic STate ANnotation Package
Description
Usage
Arguments
Value
Examples
Description
Binarize Sequencing data with the default ChromHMM binarization
Usage
1
binarizeData(obs, thresh = 1e-04)
Arguments
obs
The observations. A list of one or more entries containing the observation matrix (numeric) for the samples (e.g. chromosomes).
thresh
Upper tail probability to find a value equal or higher than Y (P(Y >= y))
Value
Binarized observation sequences as a list.
Examples
1
2
data(trainRegions)
binData = binarizeData(obs = trainRegions, thresh = 1e-4)
STAN documentation built on Nov. 8, 2020, 11:11 p.m.
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Description Usage Arguments Value Examples
Description
Binarize Sequencing data with the default ChromHMM binarization
Usage
1 | binarizeData(obs, thresh = 1e-04)
|
Arguments
obs |
The observations. A list of one or more entries containing the observation matrix ( |
thresh |
Upper tail probability to find a value equal or higher than Y (P(Y >= y)) |
Value
Binarized observation sequences as a list.
Examples
1 2 | data(trainRegions)
binData = binarizeData(obs = trainRegions, thresh = 1e-4)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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