tests/testthat/test_startObject.R

In TimiRGeN: Time sensitive microRNA-mRNA integration, analysis and network generation tool

#devtools::uses_testthat()
library(TimiRGeN)
library(testthat)

# load data
miR <- mm_miR
mRNA <- mm_mRNA

# test function
MAE <- startObject(miR = miR, mRNA = mRNA)

Data <- list("miR" = as.data.frame(miR), "mRNA" = as.data.frame(mRNA))

MAE2 <- MultiAssayExperiment(experiments = Data)

# test 1
test_that("Functional output and manual outputs are the same",{
    expect_equal(MAE, MAE2)
})

saveRDS(MAE, file= "MAE_mm.rds", compress='xz')

# human
miR <- hs_miR

mRNA <- hs_mRNA

MAE <- startObject(miR = miR, mRNA = mRNA)