attriColorGene: Attribute Color to Gene
In bioCancer: Interactive Multi-Omics Cancers Data Visualization and Analysis
Description
Usage
Arguments
Value
Examples
Description
Attribute Color to Gene
Usage
1
Arguments
df
data frame with mRNA or CNA or mutation frequency or methylation (numeric).
Value
A list colors for every gene
Examples
1
2
3
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5
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9
cgds <- CGDS("http://www.cbioportal.org/")
## Not run:
geneList <- whichGeneList("73")
ProfData <- getProfileData(cgds,
geneList, "gbm_tcga_pub_mrna", "gbm_tcga_pub_all")
rownames(ProfData) <- NULL
clr <- attriColorGene(ProfData)
## End(Not run)
bioCancer documentation built on Nov. 8, 2020, 6:26 p.m.
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Description Usage Arguments Value Examples
Description
Attribute Color to Gene
Usage
1 |
Arguments
df |
data frame with mRNA or CNA or mutation frequency or methylation (numeric). |
Value
A list colors for every gene
Examples
1 2 3 4 5 6 7 8 9 | cgds <- CGDS("http://www.cbioportal.org/")
## Not run:
geneList <- whichGeneList("73")
ProfData <- getProfileData(cgds,
geneList, "gbm_tcga_pub_mrna", "gbm_tcga_pub_all")
rownames(ProfData) <- NULL
clr <- attriColorGene(ProfData)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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