Node_obj_CNA_ProfData: Attribute CNA data to node border
In bioCancer: Interactive Multi-Omics Cancers Data Visualization and Analysis
Description
Usage
Arguments
Value
Examples
Description
Attribute CNA data to node border
Usage
1
Arguments
list
A list of data frame with CNA data. Each data frame corresponds to a study.
Value
A data frame with node border attributes
Examples
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cgds <- CGDS("http://www.cbioportal.org/")
## Not run:
GeneList <- whichGeneList("DNA_damage_Response")
ProfDataCNA <- cgdsr::getProfileData(cgds,GeneList, "brca_tcga_pub_gistic","brca_tcga_pub_all")
ListProfDataCNA <- list(ls1=ProfDataCNA, ls2=ProfDataCNA)
nodeObj <- Node_obj_CNA_ProfData(ListProfDataCNA)
## End(Not run)
bioCancer documentation built on Nov. 8, 2020, 6:26 p.m.
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Description Usage Arguments Value Examples
Description
Attribute CNA data to node border
Usage
1 |
Arguments
list |
A list of data frame with CNA data. Each data frame corresponds to a study. |
Value
A data frame with node border attributes
Examples
1 2 3 4 5 6 7 8 | cgds <- CGDS("http://www.cbioportal.org/")
## Not run:
GeneList <- whichGeneList("DNA_damage_Response")
ProfDataCNA <- cgdsr::getProfileData(cgds,GeneList, "brca_tcga_pub_gistic","brca_tcga_pub_all")
ListProfDataCNA <- list(ls1=ProfDataCNA, ls2=ProfDataCNA)
nodeObj <- Node_obj_CNA_ProfData(ListProfDataCNA)
## End(Not run)
|
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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