Node_obj_CNA_ProfData: Attribute CNA data to node border

Description Usage Arguments Value Examples

View source: R/Reactome.R

Description

Attribute CNA data to node border

Usage

1

Arguments

list

A list of data frame with CNA data. Each data frame corresponds to a study.

Value

A data frame with node border attributes

Examples

1
2
3
4
5
6
7
8
cgds <- CGDS("http://www.cbioportal.org/")
## Not run: 
GeneList <- whichGeneList("DNA_damage_Response")
ProfDataCNA <- cgdsr::getProfileData(cgds,GeneList, "brca_tcga_pub_gistic","brca_tcga_pub_all")
ListProfDataCNA <- list(ls1=ProfDataCNA, ls2=ProfDataCNA)
nodeObj <- Node_obj_CNA_ProfData(ListProfDataCNA)

## End(Not run)

bioCancer documentation built on Nov. 8, 2020, 6:26 p.m.