getFreqMutData: get mutation frequency
In bioCancer: Interactive Multi-Omics Cancers Data Visualization and Analysis

Description Usage Arguments Value Examples

get mutation frequency

1	getFreqMutData(list, geneListLabel)

`list`	a list of data frame with mutation data. Each data frame is for one study
`geneListLabel`	file name of geneList examples: "73"

a data frame with mutation frequency. gene is in rows and study is in column

cgds <- CGDS("http://www.cbioportal.org/")
## Not run: 
geneList <- whichGeneList("73")
r_data <- new.env()
MutData <- getMutationData(cgds,"gbm_tcga_pub_all",
 "gbm_tcga_pub_mutations", geneList )
FreqMut <- getFreqMutData(list(ls1=MutData, ls2=MutData), "73")

## End(Not run)