Node_obj_FreqIn: Attribute interaction frequency to node size
In bioCancer: Interactive Multi-Omics Cancers Data Visualization and Analysis
Description
Usage
Arguments
Value
Examples
Description
Attribute interaction frequency to node size
Usage
1
Node_obj_FreqIn(geneList)
Arguments
geneList
A list of gene symbol
Value
A data frame with node attributes
Examples
1
2
3
4
5
6
7
8
9
10
r_data <- new.env()
r_data[["FreqIn"]] <- structure(list(Genes = c("ATM", "ATR", "BRCA1", "BRCA2", "CHEK1",
"CHEK2", "FANCF", "MDC1", "RAD51"), FreqSum = c(0.04, 0.05, 0.05,
0.03, 0.05, 0.04, 0.03, 0.03, 0.02)), .Names = c("Genes", "FreqSum"),
class = "data.frame", row.names = c(NA, -9L))
## Not run:
GeneList <- whichGeneList("DNA_damage_Response")
nodeObj <- Node_obj_FreqIn(GeneList)
## End(Not run)
bioCancer documentation built on Nov. 8, 2020, 6:26 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Attribute interaction frequency to node size
Usage
1 | Node_obj_FreqIn(geneList)
|
Arguments
geneList |
A list of gene symbol |
Value
A data frame with node attributes
Examples
1 2 3 4 5 6 7 8 9 10 | r_data <- new.env()
r_data[["FreqIn"]] <- structure(list(Genes = c("ATM", "ATR", "BRCA1", "BRCA2", "CHEK1",
"CHEK2", "FANCF", "MDC1", "RAD51"), FreqSum = c(0.04, 0.05, 0.05,
0.03, 0.05, 0.04, 0.03, 0.03, 0.02)), .Names = c("Genes", "FreqSum"),
class = "data.frame", row.names = c(NA, -9L))
## Not run:
GeneList <- whichGeneList("DNA_damage_Response")
nodeObj <- Node_obj_FreqIn(GeneList)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.