checkDimensions: Chech wich Cases and genetic profiles are available for every...

Description Usage Arguments Value Examples

View source: R/Enrich.R

Description

Chech wich Cases and genetic profiles are available for every seleted study

Usage

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checkDimensions(panel,StudyID)

Arguments

panel

panel can take to strings 'Circomics' or 'Networking'

StudyID

Study reference using cgdsr index

Value

A data frame with two column (Cases, Genetic profiles). Every row has a dimension (CNA, mRNA...). The data frame is filled with yes/no response.

Examples

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cgds <- CGDS("http://www.cbioportal.org/public-portal/")
## Not run: 
df <- checkDimensions(panel='Networking', StudyID= "gbm_tcga_pub")

## End(Not run)

bioCancer documentation built on Nov. 17, 2017, 9:10 a.m.