checkDimensions: Chech wich Cases and genetic profiles are available for every seleted study

Description

Chech wich Cases and genetic profiles are available for every seleted study

Usage

1
checkDimensions(panel,StudyID)

Arguments

panel

panel can take to strings 'Circomics' or 'Reactome'

StudyID

Study reference using cgdsr index

Value

A data frame with two column (Cases, Genetic profiles). Every row has a dimension (CNA, mRNA...). The data frame is filled with yes/no response.

Examples

1
2
3
4
5
cgds <- CGDS("http://www.cbioportal.org/public-portal/")
## Not run: 
df <- checkDimensions(panel='Reactome', StudyID= "gbm_tcga_pub")

## End(Not run)

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.