coffeewheel: This is an htmlwidgets-based visualization tool for...

In bioCancer: Interactive Multi-Omics Cancers Data Visualization and Analysis

Description

This is an htmlwidgets-based visualization tool for hierarchical data. It is zoomable, meaning that you can interact with the hierarchy and zoom in/out accordingly.

Usage

coffeewheel(treeData, width=600, height=600, main="", partitionAttribute="value")

Arguments

treeData	A hierarchical tree data as in example
width	600
height	600
main	Title
partitionAttribute	"value"

Value

A circular layout with genetic profile.

Examples

How <- "runManually"
## Not run: 
 coffeewheel(treeData = sampleWheelData)
 
## End(Not run)

Example output

Loading required package: magrittr
Loading required package: ggplot2
Loading required package: lubridate

Attaching package: 'lubridate'

The following object is masked from 'package:base':

    date

Loading required package: tidyr

Attaching package: 'tidyr'

The following object is masked from 'package:magrittr':

    extract

Loading required package: cgdsr
Loading required package: RCurl
Loading required package: bitops

Attaching package: 'RCurl'

The following object is masked from 'package:tidyr':

    complete

Loading required package: XML

sh: 1: cannot create /dev/null: Permission denied
sh: 1: cannot create /dev/null: Permission denied
sh: 1: cannot create /dev/null: Permission denied

Warning message:
system call failed: Cannot allocate memory 

bioCancer documentation built on Nov. 8, 2020, 6:26 p.m.