processIds: Return a subset of requested GCTX row/column ids out of the...

In cTRAP: Identification of candidate causal perturbations from differential gene expression data

Description

Return a subset of requested GCTX row/column ids out of the universe of all ids

Usage

processIds(ids, all_ids, type = "rid")

Arguments

ids	vector of requested ids. If NULL, no subsetting is performed
all_ids	vector of universe of ids
type	flag indicating the type of ids being processed

Details

This is a low-level helper function which most users will not need to access directly

Value

a list with the following elements ids: a character vector of the processed ids idx: an integer list of their corresponding indices in all_ids

Source

https://github.com/cmap/cmapR

See Also

Other GCTX parsing functions: fix.datatypes(), readGctxIds(), readGctxMeta()

cTRAP documentation built on Nov. 8, 2020, 10:58 p.m.