readsToCenter: preprocess reads to count only center overlaps
In icetea: Integrating Cap Enrichment with Transcript Expression Analysis
Description
Usage
Arguments
Value
Description
preprocess reads to count only center overlaps
Usage
1
readsToCenter(reads, width = 1, fix = "center")
Arguments
reads
GAlignment object to resize
width
integer. New read length
fix
character. 'Start' for 5'
Value
Resized reads as GRanges
icetea documentation built on Nov. 8, 2020, 6:57 p.m.
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Description Usage Arguments Value
Description
preprocess reads to count only center overlaps
Usage
1 | readsToCenter(reads, width = 1, fix = "center")
|
Arguments
reads |
GAlignment object to resize |
width |
integer. New read length |
fix |
character. 'Start' for 5' |
Value
Resized reads as GRanges
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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