sampleInfo: Retrieve and replace sample information of a CapSet object

In icetea: Integrating Cap Enrichment with Transcript Expression Analysis

Description

Retrieve and replace sample information of a CapSet object

Usage

sampleInfo(object, ...)

sampleInfo(object, ...) <- value

## S4 method for signature 'CapSet'
sampleInfo(object)

## S4 replacement method for signature 'CapSet'
sampleInfo(object) <- value

Arguments

object	The CapSet object
...	Additional options
value	Replacement DataFrame object

Value

sample information data.frame

Examples

# load a previously saved CapSet object
cs <- exampleCSobject()
# get sampleinfo
si <- sampleInfo(cs)
# modify
si$samples <- paste0("sample_", seq_along(1:nrow(si)) )
# replace
sampleInfo(cs) <- si

icetea documentation built on Nov. 8, 2020, 6:57 p.m.