matter: A framework for rapid prototyping with binary data on disk

Memory-efficient reading, writing, and manipulation of structured binary data on disk as vectors, matrices, and arrays.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("matter")
AuthorKylie A. Bemis <k.bemis@northeastern.edu>
Bioconductor views Infrastructure Software
Date of publicationNone
MaintainerKylie A. Bemis <k.bemis@northeastern.edu>
LicenseArtistic-2.0
Version1.2.0
https://github.com/kuwisdelu/matter

View on Bioconductor

Functions

adata Man page
adata,matter-method Man page
apply Man page
apply,matter_mat-method Man page
atomdata Man page
atomdata,matter-method Man page
[,atoms,ANY,ANY,ANY-method Man page
[[,atoms-method Man page
bigglm,formula,matter_mat-method Man page
bigglm.out Man page
c,atoms-method Man page
chunksize Man page
chunksize<- Man page
chunksize<-,matter-method Man page
chunksize,matter-method Man page
class:matter Man page
c,matter-method Man page
colMeans,matter_mat-method Man page
colSds Man page
colSds,matter_mat-method Man page
colSums,matter_mat-method Man page
colVars Man page
colVars,matter_mat-method Man page
data:matter_ex Man page
datamode Man page
datamode<- Man page
datamode<-,atoms-method Man page
datamode,atoms-method Man page
datamode<-,matter-method Man page
datamode,matter-method Man page
dim<-,matter-method Man page
dim,matter-method Man page
dimnames<-,matter,ANY-method Man page
dimnames,matter-method Man page
filemode Man page
filemode<- Man page
filemode<-,matter-method Man page
filemode,matter-method Man page
length,atoms-method Man page
length<-,matter-method Man page
length,matter-method Man page
matter Man page
matter-class Man page
matter_ex Man page
mean Man page
mean.matter Man page
mean,matter-method Man page
names<-,matter-method Man page
names,matter-method Man page
paths Man page
paths<- Man page
paths<-,matter-method Man page
paths,matter-method Man page
prcomp Man page
prcomp,matter_mat-method Man page
prcomp.out Man page
rowMeans,matter_mat-method Man page
rowSds Man page
rowSds,matter_mat-method Man page
rowSums,matter_mat-method Man page
rowVars Man page
rowVars,matter_mat-method Man page
scale Man page
scale.matter Man page
scale,matter_mat-method Man page
sd Man page
sd,matter-method Man page
sum Man page
sum,matter-method Man page
var Man page
var,matter-method Man page

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/apply.R R/atoms.R R/bigglm.R R/drle.R R/matter.R R/matterGenerics.R R/matter_mat.R R/matter_vec.R R/prcomp.R R/stats.R R/utils.R
README.md
TODO
build
build/vignette.rds
data
data/matter_ex.rda
inst
inst/doc
inst/doc/matter.R
inst/doc/matter.Rnw
inst/doc/matter.pdf
inst/vignettesExtra
inst/vignettesExtra/matter-extra.Rnw
inst/vignettesExtra/matter-extra.bib
man
man/apply.Rd man/bigglm.Rd
man/delayed-ops.rd
man/drle-class.rd
man/matter-class.Rd man/matter_ex.Rd
man/matter_mat-class.rd
man/matter_vec-class.rd
man/prcomp.Rd man/scale.Rd man/summary-stats.Rd
src
src/init.cpp
src/matter.cpp
src/matter.h
src/matterDefines.h
src/utils.cpp
src/utils.h
tests
tests/testthat
tests/testthat.R tests/testthat/test-matter.R
vignettes
vignettes/matter.Rnw
vignettes/matter.bib

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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All documentation is copyright its authors; we didn't write any of that.