annotateFreq: Annotate a graph with frequency of nodes/edges in other...
In rTRM: Identification of transcriptional regulatory modules from PPI networks
Description
Usage
Arguments
Details
Author(s)
Description
Returns an annotated graph with node size and edge width proportional at the number of occurrences of nodes/edges in a suplied list of graphs.
Usage
1
annotateFreq(g, graph_list)
Arguments
g
target graph to annotate.
graph_list
list of graph to extract information from.
Details
Commonly graph_list refers to a list of predicted TRMs (with findTRM) and g is the combined TRM. This function annotates the nodes/edges in g to known their frequency in the original list of graphs.
Author(s)
Diego Diez
rTRM documentation built on Nov. 8, 2020, 5:52 p.m.
R Package Documentation
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Description Usage Arguments Details Author(s)
Description
Returns an annotated graph with node size and edge width proportional at the number of occurrences of nodes/edges in a suplied list of graphs.
Usage
1 | annotateFreq(g, graph_list)
|
Arguments
g |
target graph to annotate. |
graph_list |
list of graph to extract information from. |
Details
Commonly graph_list refers to a list of predicted TRMs (with findTRM) and g is the combined TRM. This function annotates the nodes/edges in g to known their frequency in the original list of graphs.
Author(s)
Diego Diez
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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