getConcentricList: Returns a list with nodes membership to be used in a graph...
In rTRM: Identification of transcriptional regulatory modules from PPI networks
Description
Usage
Arguments
Author(s)
Description
Specify target and enriched motifs and returns a list with circle membership. This information is used by layout.concentric to position the nodes in plots.
Usage
1
getConcentricList(g, t, e, max.size = 60, order.by = "label")
Arguments
g
graph to layout (extract the nodes).
t
list of target nodes (will go in the center).
e
list of enriched nodes (will go in the periphery).
max.size
maximum number of nodes per layer.
order.by
ordering attribute for list before split.
Author(s)
Diego Diez
rTRM documentation built on Nov. 8, 2020, 5:52 p.m.
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Description Usage Arguments Author(s)
Description
Specify target and enriched motifs and returns a list with circle membership. This information is used by layout.concentric to position the nodes in plots.
Usage
1 | getConcentricList(g, t, e, max.size = 60, order.by = "label")
|
Arguments
g |
graph to layout (extract the nodes). |
t |
list of target nodes (will go in the center). |
e |
list of enriched nodes (will go in the periphery). |
max.size |
maximum number of nodes per layer. |
order.by |
ordering attribute for list before split. |
Author(s)
Diego Diez
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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