layout.arc: Layouts a graph using arcs.

In rTRM: Identification of transcriptional regulatory modules from PPI networks

Description

Generates a layout for graphs that places in the center the target transcription factors, in the sides the enriched transcription factors and in between of them the bridge proteins.

Usage

layout.arc(g, target, query)

Arguments

g	the graph object to layout.
target	list of target nodes (typically target transcription factors.)
query	list of query nodes (typically enriched transcription factors.)

Value

A matrix with the x and y locations of each node in the target graph.

Author(s)

Diego Diez

rTRM documentation built on Nov. 8, 2020, 5:52 p.m.