writeTRMreport: Export a table with TRM nodes and associated information.
In rTRM: Identification of transcriptional regulatory modules from PPI networks
Description
Usage
Arguments
Author(s)
Description
This function generates a data.frame with the nodes in the provided graph and associated annotations.
Usage
1
writeTRMreport(graph, file, organism, target, query, sort.by = "symbol")
Arguments
graph
a graph object.
file
file name.
organism
organisms for the annotations.
target
target transcription factor.
query
query transcription factors.
sort.by
order the columns of the data.frame by (default: "symbol").
Author(s)
Diego Diez
rTRM documentation built on Nov. 8, 2020, 5:52 p.m.
R Package Documentation
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Description Usage Arguments Author(s)
Description
This function generates a data.frame with the nodes in the provided graph and associated annotations.
Usage
1 | writeTRMreport(graph, file, organism, target, query, sort.by = "symbol")
|
Arguments
graph |
a graph object. |
file |
file name. |
organism |
organisms for the annotations. |
target |
target transcription factor. |
query |
query transcription factors. |
sort.by |
order the columns of the data.frame by (default: "symbol"). |
Author(s)
Diego Diez
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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