getSequencesFromGenome: Retrieves a set of sequences from a BSgenome object and...

Description Usage Arguments Author(s)

View source: R/tools.R

Description

This is just a wrapper to getSeq() in package Biostrings that facilitates adding a label to each sequence.

Usage

1
getSequencesFromGenome(BED, genome, append.id)

Arguments

BED

file with peak locations in BED format.

genome

a BSgenome object (e.g. Mmusculus)

append.id

optional label to append to each sequence id.

Author(s)

Diego Diez


rTRM documentation built on May 31, 2017, 11:35 a.m.

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