splatSimDE: Simulate group differential expression

Description Usage Arguments Value

Description

Simulate differential expression. Differential expression factors for each group are produced using getLNormFactors and these are added along with updated means for each group. For paths care is taked to make sure they are simulated in the correct order.

Usage

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splatSimGroupDE(sim, params)

splatSimPathDE(sim, params)

Arguments

sim

SingleCellExperiment to add differential expression to.

params

splatParams object with simulation parameters.

Value

SingleCellExperiment with simulated differential expression.


splatter documentation built on Dec. 7, 2018, 6 p.m.