API for uSORT
uSORT: A self-refining ordering pipeline for gene selection
| Global functions | |
|---|---|
| EXP_to_CellDataSet | Man page Source code |
| Rwanderlust | Man page Source code |
| SPIN | Man page Source code |
| STS_sorting | Man page Source code |
| STS_sorting_wrapper | Man page Source code |
| STS_sortingcost | Man page Source code |
| autoSPIN | Man page Source code |
| clusterGenes1 | Man page Source code |
| compareModels1 | Man page Source code |
| diff_test_helper1 | Man page Source code |
| differentialGeneTest1 | Man page Source code |
| diffusionmap | Source code |
| distance.function | Man page Source code |
| driving_force_gene_selection | Man page Source code |
| elbow_detection | Man page Source code |
| fluidigmSC_analyzeGeneDetection | Man page Source code |
| fluidigmSC_identifyExpOutliers | Man page Source code |
| fluidigmSC_isElementIgnoreCase | Man page Source code |
| fluidigmSC_readLinearExp | Man page Source code |
| fluidigmSC_removeGenesByLinearExpForAllType | Man page Source code |
| fluidigmSC_removeGenesByLinearExpForAllType_log2 | Man page Source code |
| mcesApply1 | Source code |
| monocle_wrapper | Man page Source code |
| neighborhood_sorting | Man page Source code |
| neighborhood_sorting_wrapper | Man page Source code |
| neighborhood_sortingcost | Man page Source code |
| pca | Source code |
| pca_gene_selection | Man page Source code |
| realign_trajectory | Source code |
| sWanderlust | Man page Source code |
| scattering_quantification_per_gene | Man page Source code |
| sorting_method_parameter_GUI | Man page Source code |
| spdists_klnn | Source code |
| summed_local_variance | Man page Source code |
| summed_local_variance_cyclical | Man page Source code |
| summed_local_variance_linear | Man page Source code |
| trajectory_landmarks | Man page Source code |
| uSORT | Man page Source code |
| uSORT-package | Man page |
| uSORT_GUI | Man page Source code |
| uSORT_parameters_GUI | Man page Source code |
| uSORT_preProcess | Man page Source code |
| uSORT_sorting_wrapper | Man page Source code |
| uSORT_write_results | Man page Source code |
| variability_per_gene | Man page Source code |
| wanderlust_wrapper | Man page Source code |
| weighting_scheme | Source code |
